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MISC lab resources

Lab manual

Boilerplate fMRIprep methods for all lab papers using fMRIprep v20.2

Dr. Hogeveen's Data Science in Psychology & Neuroscience Course (In Development, Fall 2020) 


Sample CONN Toolbox Batch script (single subject, additional code for running in parallel on a cluster and merging to single group-level available on request)

Sample Bash script for opening FreeSurfer output

Shell script for running FSL's BET tool on a T1w image

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